![](/static/img/minimal_logo2.png)
ATLIGATOR
Web interface of the ATLas based LIGAnd binding ediTOR
Due to technical maintenance the server will be down on April 18th to 19th. We are sorry for this
inconvenience.
Find more resources in video form about the usage of ATLIGATOR web on our
YouTube channel!
Structures
![Image of a protein structure complex
containing a protein and a peptide ligand in cartoon representation.](/static/img/structure.png)
Collections of PDB structures providing the input for the generation of atlases and the discovery of pockets.
ExploreAtlases
![Image of an Atlas visualized with Ca and
Cbeta coordinates of ligand and binder residues](/static/img/atlas.png)
Discover pair-wise interaction patterns between amino acid residues, forming the basis for pocket discovery and binder design.
ExplorePockets
![Image of a pocket visualized with
all atoms](/static/img/pocket.png)
Discover, inspect, and annotate binding pockets automatically discovered by an atlas based itemset analysis.
Explore