ATLIGATOR

Derived from Atlas:

c.10 (leucine-rich repeats)

Maximum Pockets per Ligand Residue:

Minimum Pocket Size:

Confidence Threshold:

Support Threshold:

Cardinality Base:

Distance Factor:

Orientation Factor:

Secondary Orientation Factor:

Variance Threshold:

Mined pockets and their support values, grouped by ligand:

ALA	HFY (5% or 2 of 36)	HFYY (2% or 1 of 36)
ARG	DDD (11% or 15 of 128)	NDV (9% or 12 of 128)	DDH (7% or 9 of 128)	DDDHH (5% or 7 of 128)	DDV (4% or 6 of 128)	NDEV (4% or 6 of 128)	DDQ (3% or 5 of 128)	DDE (3% or 5 of 128)	DET (3% or 5 of 128)	NDDV (3% or 4 of 128)
ASN	RNS (4% or 7 of 149)	ASY (1% or 2 of 149)	DDS (1% or 2 of 149)
ASP	RRV (4% or 6 of 137)	RNK (2% or 4 of 137)	RKK (2% or 3 of 137)	RNS (1% or 2 of 137)	RDP (1% or 2 of 137)	RQK (1% or 2 of 137)
GLN	PYY (2% or 3 of 111)	RHTT (1% or 2 of 111)	RQE (1% or 2 of 111)	NNL (1% or 2 of 111)	ELP (1% or 2 of 111)	STT (1% or 2 of 111)	ARD (1% or 2 of 111)
GLU	RHK (2% or 3 of 107)	RRRQ (1% or 2 of 107)	NKKS (1% or 2 of 107)	RKK (1% or 2 of 107)
HIS	RFT (3% or 3 of 81)	DES (3% or 3 of 81)	ESTYV (2% or 2 of 81)	NDET (2% or 2 of 81)	NDQ (2% or 2 of 81)	DEK (2% or 2 of 81)	NDQQP (1% or 1 of 81)	NDQET (1% or 1 of 81)	NDEKT (1% or 1 of 81)	DDMSV (1% or 1 of 81)
ILE	REPT (2% or 1 of 48)	NMM (2% or 1 of 48)	QQL (2% or 1 of 48)	EKS (2% or 1 of 48)	LKTT (2% or 1 of 48)
LEU	QQL (2% or 2 of 85)	LKWYV (1% or 1 of 85)	RNK (1% or 1 of 85)	RDF (1% or 1 of 85)	RLY (1% or 1 of 85)	DFS (1% or 1 of 85)	DFW (1% or 1 of 85)	QLL (1% or 1 of 85)	QPV (1% or 1 of 85)
LYS	DYY (2% or 5 of 185)	DDD (2% or 4 of 185)	DET (2% or 4 of 185)	EGK (2% or 4 of 185)	DES (1% or 3 of 185)	DFS (1% or 3 of 185)	DEFSS (1% or 2 of 185)	DDDY (1% or 2 of 185)	NNT (1% or 2 of 185)	DDDE (1% or 2 of 185)
MET	NLKS (9% or 1 of 11)	DIYV (9% or 1 of 11)	NEK (9% or 1 of 11)	HIM (9% or 1 of 11)	IMF (9% or 1 of 11)	ITY (9% or 1 of 11)
PHE	QIYY (4% or 2 of 42)	REHY (2% or 1 of 42)	ILWY (2% or 1 of 42)	AQY (2% or 1 of 42)	RHT (2% or 1 of 42)	EHK (2% or 1 of 42)	HSY (2% or 1 of 42)	PYV (2% or 1 of 42)
PRO	QEL (3% or 2 of 58)	QLFP (1% or 1 of 58)	ARN (1% or 1 of 58)	NEI (1% or 1 of 58)	LWY (1% or 1 of 58)	ARW (1% or 1 of 58)
SER	RNS (4% or 8 of 176)	HHFT (1% or 3 of 176)	DEK (1% or 3 of 176)	NHHFT (1% or 2 of 176)	DEHWY (1% or 2 of 176)	RDK (1% or 2 of 176)	RDT (1% or 2 of 176)	DHF (1% or 2 of 176)	DLL (1% or 2 of 176)
THR	RRDP (1% or 2 of 142)	NHK (1% or 2 of 142)	EHW (1% or 2 of 142)
TRP	EGST (10% or 2 of 19)	RLLKKF (5% or 1 of 19)	NDKST (5% or 1 of 19)	RQY (5% or 1 of 19)	DKF (5% or 1 of 19)
TYR	IKT (13% or 10 of 74)	NQF (2% or 2 of 74)	RHLL (2% or 2 of 74)	RDQLK (1% or 1 of 74)	AQEK (1% or 1 of 74)	DHFP (1% or 1 of 74)	MMFV (1% or 1 of 74)	NIK (1% or 1 of 74)	QYY (1% or 1 of 74)	ADDCQP (1% or 1 of 74)
VAL	NTT (16% or 6 of 37)	RND (5% or 2 of 37)