ATLIGATOR

Derived from Atlas:

shared atlas

Maximum Pockets per Ligand Residue:

Minimum Pocket Size:

Confidence Threshold:

Support Threshold:

Cardinality Base:

Distance Factor:

Orientation Factor:

Secondary Orientation Factor:

Variance Threshold:

Mined pockets and their support values, grouped by ligand:

ALA	EYY (3% or 118 of 3525)	WYY (1% or 61 of 3526)	EKYY (1% or 57 of 3525)	EWYY (1% or 48 of 3526)	YYY (1% or 40 of 3526)	EYYY (1% or 36 of 3526)
ARG	DEE (5% or 272 of 4991)	DYV (5% or 262 of 4991)	DKY (5% or 261 of 4991)	REE (5% or 260 of 4991)	DKYV (4% or 235 of 4991)	DKPYV (4% or 213 of 4991)	DDE (3% or 177 of 4991)	DWY (3% or 169 of 4991)	EEY (3% or 161 of 4991)	REY (3% or 160 of 4991)
ASN	QEY (3% or 114 of 3634)	FPT (3% or 112 of 3634)	QQY (2% or 99 of 3634)	QEF (2% or 84 of 3634)	QFY (2% or 82 of 3634)	QQEWY (2% or 79 of 3634)	AFT (2% or 74 of 3633)	AFPT (1% or 62 of 3634)	QQEFWY (1% or 58 of 3634)	QSY (1% or 52 of 3634)
ASP	RYV (4% or 210 of 5014)	RNK (3% or 152 of 5014)	AHHL (2% or 147 of 5014)	RKK (2% or 132 of 5014)	RYY (2% or 116 of 5014)	RNT (2% or 102 of 5014)	RNS (1% or 96 of 5014)	AHHLL (1% or 85 of 5014)	RKT (1% or 78 of 5014)	AGHHL (1% or 74 of 5014)
CYS	DHK (8% or 29 of 333)	DHY (4% or 14 of 333)	DWY (4% or 14 of 333)	DCH (3% or 11 of 333)	RWY (2% or 9 of 333)	KTW (2% or 9 of 333)	KWY (2% or 9 of 333)	TWY (2% or 9 of 333)	DCHY (2% or 8 of 333)	DLTW (2% or 8 of 333)
GLN	ARY (3% or 112 of 2879)	RDY (3% or 102 of 2879)	QFT (2% or 85 of 2879)	RNG (2% or 78 of 2879)	ADY (2% or 77 of 2879)	NGT (2% or 77 of 2879)	RNT (2% or 77 of 2879)	RND (2% or 70 of 2879)	RNGT (2% or 67 of 2879)	ARDY (2% or 65 of 2879)
GLU	RYY (3% or 156 of 4660)	RNY (2% or 96 of 4660)	ESY (1% or 78 of 4660)	RHY (1% or 76 of 4660)	RKS (1% or 76 of 4660)	NYY (1% or 76 of 4660)	RWY (1% or 75 of 4660)	RRY (1% or 72 of 4660)	EYY (1% or 70 of 4660)	REK (1% or 69 of 4660)
GLY	EYY (1% or 34 of 3140)
HIS	RET (3% or 88 of 2690)	RDFPSW (2% or 74 of 2690)	DLY (2% or 74 of 2690)	EGT (2% or 69 of 2690)	DHLLM (2% or 64 of 2690)	RYV (1% or 52 of 2690)	EFY (1% or 35 of 2690)	NET (1% or 34 of 2690)	MFS (1% or 33 of 2690)	RDE (1% or 33 of 2690)
ILE	RFY (4% or 78 of 1876)	DFY (3% or 74 of 1876)	RDFY (3% or 66 of 1876)	EYY (3% or 64 of 1876)	YYY (3% or 64 of 1876)	WYY (3% or 61 of 1876)	TYY (2% or 55 of 1876)	EYYY (2% or 54 of 1876)	KYY (2% or 51 of 1875)	TWY (2% or 50 of 1876)
LEU	KYY (6% or 245 of 4036)	DLT (4% or 201 of 4036)	EYY (4% or 181 of 4036)	DHL (4% or 172 of 4036)	WYY (4% or 166 of 4035)	LYY (4% or 165 of 4036)	TWY (4% or 163 of 4036)	TYY (3% or 156 of 4036)	LWY (3% or 152 of 4036)	EMFYYV (3% or 124 of 4036)
LYS	DEY (2% or 126 of 4684)	EEY (2% or 126 of 4684)	NND (2% or 124 of 4684)	DDE (2% or 106 of 4684)	DEE (2% or 94 of 4684)	NDH (1% or 92 of 4684)	NDD (1% or 90 of 4684)	DDY (1% or 88 of 4684)	NDT (1% or 86 of 4684)	NNDH (1% or 80 of 4684)
MET	TYY (7% or 87 of 1227)	STY (7% or 87 of 1227)	SYY (6% or 81 of 1227)	WYY (6% or 75 of 1227)	SWY (6% or 74 of 1227)	STYY (5% or 71 of 1227)	SWYY (5% or 65 of 1227)	TWYY (5% or 63 of 1227)	MSW (5% or 62 of 1227)	STWYY (4% or 55 of 1227)
PHE	QFY (3% or 69 of 1883)	NFV (3% or 66 of 1883)	FYV (3% or 63 of 1883)	NQF (3% or 58 of 1883)	NFY (2% or 56 of 1883)	WYY (2% or 51 of 1883)	QYY (2% or 51 of 1883)	LYY (2% or 50 of 1883)	AHY (2% or 49 of 1883)	NQFY (2% or 49 of 1883)
PRO	NFY (1% or 50 of 3470)	FPT (1% or 50 of 3470)	RDF (1% or 37 of 3470)	NFYYY (1% or 35 of 3470)
SER	EYY (2% or 120 of 4523)	EKYY (2% or 106 of 4523)	EKYYY (2% or 92 of 4523)	EWY (1% or 88 of 4523)	WYY (1% or 87 of 4523)	EKWYYY (1% or 63 of 4523)	RWY (1% or 56 of 4523)	NEY (1% or 50 of 4523)	NFW (1% or 50 of 4523)	RYY (1% or 49 of 4523)
THR	NND (2% or 103 of 4148)	QQG (1% or 76 of 4148)	HPY (1% or 72 of 4148)	RDK (1% or 67 of 4148)	KWV (1% or 57 of 4148)	NDV (1% or 57 of 4148)	NWV (1% or 55 of 4148)	DTV (1% or 54 of 4148)	KSW (1% or 51 of 4148)	NDEV (1% or 47 of 4148)
TRP	RDK (11% or 145 of 1305)	RDKK (5% or 75 of 1305)	ANLY (5% or 70 of 1305)	RDIK (5% or 69 of 1305)	IMT (3% or 48 of 1305)	QHW (3% or 44 of 1305)	MMT (2% or 38 of 1305)	IMM (2% or 36 of 1305)	QEHW (2% or 36 of 1305)	RDIKK (2% or 35 of 1305)
TYR	RDY (4% or 166 of 3512)	RYY (3% or 129 of 3512)	YYY (3% or 111 of 3511)	NGW (3% or 108 of 3512)	AGF (3% or 106 of 3512)	NKW (2% or 98 of 3512)	DYY (2% or 98 of 3512)	WYY (2% or 94 of 3512)	TYY (2% or 92 of 3512)	RDYY (2% or 82 of 3512)
VAL	TYY (4% or 133 of 2696)	DTY (4% or 118 of 2696)	DTYY (3% or 104 of 2696)	TWY (3% or 103 of 2696)	TWYY (3% or 92 of 2696)	KYY (3% or 91 of 2696)	DLTYY (3% or 86 of 2696)	DTW (3% or 83 of 2696)	DTWY (2% or 74 of 2696)	DKTYY (2% or 72 of 2696)