ATLIGATOR

Derived from Atlas:

d.211.1 (ankyrin repeat)

Maximum Pockets per Ligand Residue:

Minimum Pocket Size:

Confidence Threshold:

Support Threshold:

Cardinality Base:

Distance Factor:

Orientation Factor:

Secondary Orientation Factor:

Variance Threshold:

Mined pockets and their support values, grouped by ligand:

ALA	NLY (21% or 4 of 19)	NKW (5% or 1 of 19)
ARG	RNE (30% or 31 of 102)	RNNEEV (21% or 22 of 102)	DEHFW (20% or 21 of 102)	DEHLFW (17% or 18 of 102)	RRNNEV (15% or 16 of 102)	RRNNEEV (13% or 14 of 101)	DDE (6% or 7 of 101)	DDEHFW (4% or 5 of 102)	RNNEESV (3% or 4 of 102)	DDEHLFW (2% or 3 of 102)
ASN	EFWW (4% or 2 of 44)	RRL (4% or 2 of 44)	RRK (2% or 1 of 44)	GFV (2% or 1 of 44)
ASP	RNHKFSY (20% or 15 of 72)	KKS (6% or 5 of 72)	RRNHKFSY (4% or 3 of 72)	KKSY (4% or 3 of 72)	KKSSY (2% or 2 of 72)	KKKS (2% or 2 of 72)	HKP (2% or 2 of 72)	QKKKSSY (1% or 1 of 72)	RRADKS (1% or 1 of 72)	RNNQK (1% or 1 of 72)
CYS	RWY (50% or 2 of 4)
GLN	RKY (11% or 9 of 81)	QLPT (4% or 4 of 81)	RKYY (4% or 4 of 81)	RSW (3% or 3 of 81)	RNH (3% or 3 of 81)	KSY (3% or 3 of 81)	RKSW (2% or 2 of 81)	RDSWY (2% or 2 of 81)	RQKSW (1% or 1 of 81)	RDKSWY (1% or 1 of 81)
GLU	AKS (3% or 2 of 61)	QKY (3% or 2 of 61)	HHK (3% or 2 of 61)	RRNHF (1% or 1 of 61)	RPTT (1% or 1 of 61)	HHIK (1% or 1 of 61)	QGS (1% or 1 of 61)	EKY (1% or 1 of 61)	HKK (1% or 1 of 61)	IDS (1% or 1 of 61)
GLY	GYY (44% or 21 of 47)
HIS	RRE (13% or 4 of 30)	EHL (6% or 2 of 30)	DDH (6% or 2 of 30)	NQHIW (3% or 1 of 30)	RREL (3% or 1 of 30)	NEH (3% or 1 of 30)	NHY (3% or 1 of 30)	DFW (3% or 1 of 30)	EYV (3% or 1 of 30)	DDDQEH (3% or 1 of 30)
ILE	FSY (16% or 3 of 18)	RFS (16% or 3 of 18)	RFY (16% or 3 of 18)	RFSY (11% or 2 of 18)	NFSY (11% or 2 of 18)	RNFSY (5% or 1 of 18)	NLL (5% or 1 of 18)
LEU	GYYY (4% or 2 of 47)	PWVV (2% or 1 of 47)	ADIW (2% or 1 of 47)	MFP (2% or 1 of 47)	YVV (2% or 1 of 47)	LLV (2% or 1 of 47)
LYS	EEGL (5% or 2 of 36)	ELY (5% or 2 of 36)	DEEH (2% or 1 of 36)	RDE (2% or 1 of 36)	RQY (2% or 1 of 36)	NNN (2% or 1 of 36)	NEY (2% or 1 of 36)	DEL (2% or 1 of 36)	DLS (2% or 1 of 36)
MET	REL (7% or 1 of 14)	GPW (7% or 1 of 14)
PHE	ILPY (2% or 1 of 39)	QVV (2% or 1 of 39)	EGY (2% or 1 of 39)
PRO	NLS (33% or 16 of 48)	NLSY (29% or 14 of 48)	ELS (18% or 9 of 48)	RNLS (16% or 8 of 48)	NELS (16% or 8 of 48)	RNLSY (14% or 7 of 48)	NELSY (12% or 6 of 48)	RNELS (10% or 5 of 48)	RNELSY (8% or 4 of 48)	RLMY (2% or 1 of 48)
SER	KKY (28% or 24 of 83)	HKY (18% or 15 of 83)	HKKY (13% or 11 of 83)	DKY (4% or 4 of 83)	DHKKY (3% or 3 of 83)	RDFY (2% or 2 of 83)	RNL (2% or 2 of 83)	LPP (2% or 2 of 83)	RNLMY (1% or 1 of 83)	QEPP (1% or 1 of 83)
THR	NNDDEHFW (3% or 1 of 29)	RNHY (3% or 1 of 29)	NILK (3% or 1 of 29)	DEM (3% or 1 of 29)	ILM (3% or 1 of 29)	RQE (3% or 1 of 29)
TRP	ARDI (12% or 1 of 8)	ANNP (12% or 1 of 8)	IWYY (12% or 1 of 8)	RQP (12% or 1 of 8)	MPY (12% or 1 of 8)
TYR	EGLT (18% or 5 of 27)	RQGS (14% or 4 of 27)	RQGPS (11% or 3 of 27)	NQEM (11% or 3 of 27)	RDQGPS (7% or 2 of 27)	RQGPPS (7% or 2 of 27)	HLL (7% or 2 of 27)	LFV (7% or 2 of 27)	RDQQGPS (3% or 1 of 27)	RDQGPPS (3% or 1 of 27)
VAL	RHI (4% or 1 of 21)	LLL (4% or 1 of 21)